CDS

Accession Number TCMCG066C33626
gbkey CDS
Protein Id XP_034573734.1
Location complement(join(6406942..6407102,6407719..6407833,6408227..6408288,6408490..6408598,6408672..6408718,6408812..6408954,6409432..6409505,6409805..6409978))
Gene LOC117837989
GeneID 117837989
Organism Setaria viridis

Protein

Length 294aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034717843.1
Definition ribosomal RNA small subunit methyltransferase E isoform X1 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category J
Description RNA methyltransferase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K09761        [VIEW IN KEGG]
EC 2.1.1.193        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000154        [VIEW IN EMBL-EBI]
GO:0001510        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008170        [VIEW IN EMBL-EBI]
GO:0008173        [VIEW IN EMBL-EBI]
GO:0008649        [VIEW IN EMBL-EBI]
GO:0008757        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016436        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0031167        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070042        [VIEW IN EMBL-EBI]
GO:0070475        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140102        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCGTCCGTATCCGCCTTCTCTTCCTCATCCTCAGCTCTGCTGCGCGGGCCCCCGCGGGTCCGGCGCCTCCTCGCCGCCGCCGCGACGCGCGCGCACAGCAGCGCCGCAGGCGCGAGTCGCGCTCGCGGTGGGCTGCCGCGGTTCCACACCCCGTCGCTCCCCTCTTCGAAGGGTGAAGTGATCCGCATCCAAGGAGACGAGTTCTGGCACATGACGCGGGTTTTGCGCCTTGGCGTCAATGACAGGGTTGAGCTATTTGATGGGGTGGGCGGTTTAGTTGAAGGGTCCATACAGAAAGTTGACAAGGGTGGCTCGGATGTTGAGTTATTAGAGGATGCTAGGCTCATAGCTCCTCAAGGCATCCAATGGCATGTCTTTGCTGCATTTGGGACCCTGAAAGGTGGACGTGCAGATTGGCTTATAGAGAAATGTACTGAACTTGGAGCTTGTAGTGTTACCCCTCTTCTGACTGAACGATGTCATACTATAGCAGAAAATAGGGTGGACAGGTTGCAACGCCTTGTGTTGTCTGCAGTTAAACAATGCCAGAGAATACATGAAATGTCATTGAAGCCCCCAATTCAGATAGGCAACCTTCTACCTGTTGTGTCACAGTCAAAGCTTGCTTTCCTAGCATCAGCAGAAGCTCCTCCTCTTTTAAGGGTCCTGCCAAAATCCAGCAATGAACAAAGCGGGCTTTTGATTATTGGACCTGAAGGAGACTTCACGGAAGATGAGGTACATGCACTGAAATCAGCAGGCGCAGGCCCTGTCGGTCTTGGTCCATGCAGGCTACGAGTTGAGACAGCCACGATATCGCTCCTATCTGCTCTCATGCTATGGTCGGATGCTAAACACCAAGAAACAGAGCAATGCAGGTAG
Protein:  
MPSVSAFSSSSSALLRGPPRVRRLLAAAATRAHSSAAGASRARGGLPRFHTPSLPSSKGEVIRIQGDEFWHMTRVLRLGVNDRVELFDGVGGLVEGSIQKVDKGGSDVELLEDARLIAPQGIQWHVFAAFGTLKGGRADWLIEKCTELGACSVTPLLTERCHTIAENRVDRLQRLVLSAVKQCQRIHEMSLKPPIQIGNLLPVVSQSKLAFLASAEAPPLLRVLPKSSNEQSGLLIIGPEGDFTEDEVHALKSAGAGPVGLGPCRLRVETATISLLSALMLWSDAKHQETEQCR